cis-Analyst Whole Genome Plots (from Berman et. al. 2001)

Number of clusters per arm:

Clusters on arm 2L = 4
Clusters on arm 2R = 6
Clusters on arm 3L = 7
Clusters on arm 3R = 5
Clusters on arm 4 = 0
Clusters on arm X = 9
Clusters total (non-overlapping) = 31

Links to 500kb segment plots
(only those segments with at least one cluster are displayed)

PlotArmStart(bp)End(bp)Genes
[plot]2L35000014010001CG10017 , CG10019 , CG10020 , bowl , CG10022 , CG10030 , CG10031 , for , CG10039 , CG3604 , slp2 , CG12675 , CG12676 , CG3390 , CG3393 , capu , CG16704 , CG16712 , CG16713 , CG3407 , CG3410 , slp1 , CG2788 , odd , CG3513 , CG2808 , CG2816 , CG2818 , Shaw , CG3920 , CG3921 , CG3964 , CG3980 , CG15416 , CG15418 , CG15419 , CG15420 , CG15421 , CG15422 , CG15423
[plot]2L1250000113010001CG15483 , CG15484 , CG15485 , CG15486 , CG15487 , CG15488 , CG5075 , CG5092 , CG6153 , CG6167 , CG6180 , kek1 , pdm2 , CG12292 , CG5142 , CG6214 , nub , CG5525 , CG3762 , CG17031 , CG17036 , CG5983 , CG9932 , CG9933 , CG9934 , Vha68 , CG12404 , CG17174 , CG17176 , CG17178 , CG16800 , CG5776 , CG5780 , CG5781 , CG5787 , CG5792
[plot]2L1350000114010001BG:DS00941.14 , BG:DS00941.15 , BG:DS08220.1 , BG:DS00797.2 , BG:DS08249.3 , BG:BACR48E02.4 , BG:DS05899.7 , BG:DS08249.2 , BG:DS05899.4 , BG:DS00797.1 , p38b , Ance , BG:DS01759.2 , Sos , BG:DS00180.12 , BG:DS00180.14 , Cyp28a5 , BG:DS01368.1 , BG:DS05899.1 , bgm , b , CG7491 , CAH1 , Orc5 , rk , RpII33 , BG:DS00180.10 , CG8954 , DNApol-gamma35 , Sop2 , tam , BG:DS00941.12 , CG18634 , CG16861 , BG:DS00797.6 , BG:DS00941.3 , CG16866 , CG16867 , CG16869 , Acyp , BG:DS00180.9 , BG:DS05899.3 , BG:DS05899.5 , BG:DS01759.1 , l(2)34Fa , BG:DS00180.8 , BG:DS00180.3 , CG16885 , BG:DS00180.2 , BG:DS00941.11 , CG16888 , adat , BG:DS00797.4 , kuz , CG17988 , BG:DS00797.5 , BG:DS00797.7 , BG:DS00941.13
[plot]2L1800000118510001CG10413 , CG10414 , Fas3 , CG15156 , CG15157 , CG15158 , CG15159 , CG15160 , CG15161 , CG15162 , CG15165 , CG10174 , CG10176 , CG10178 , CG12750 , CG10211 , CG10231 , CG10275 , CG10283 , CG10302 , RpS26 , CG10333 , Acp36DE , CG7167 , Cyp310a1 , amos , CG7180 , CG5790
[plot]2R45000015010001CG12930 , CG12931 , CG12932 , CG12933 , CG1418 , Mef2 , CG1441 , CG1472 , CG1809 , CG1814 , CG1818 , CG15863 , CG1821 , Map60 , CG1827 , CG1863 , CG1868 , CG1874 , CG1884 , CG1888 , CG10459 , CG1513 , BcDNA:GH06348 , Prosalpha7 , CG18446 , CG1902 , Orc6 , Wnt2 , CG1599 , CG1931 , CG10536 , CG12744 , CG8809 , eve , Fmrf , CG1623 , CG1625 , CG1648 , CG1652 , CG1656 , CG1663 , CG1665 , CG1667 , CG1671 , CG1675 , BcDNA:GH04802 , CG1690 , trpl , CG1698 , dap , CG1773 , CG1776 , Uba1 , CG1794 , CG12130 , CG12131 , CG12133 , CG12134 , CG12138 , CG12140 , CG12922 , CG12923 , CG12924 , CG12926 , CG12927 , CG12928 , CG12929
[plot]2R50000015510001CG1407 , CG15862 , CG18377 , CG3298 , CG12208 , CG12209 , Syb , CG12214 , CG12215 , CG18011 , G-oalpha47A , Pfk , CG2249 , CG18408 , CG18409 , CG2264 , CG2269 , Jra , CG2292 , CG18445 , CG17753 , CG17765 , eve , TER94 , CG3451 , CG3454 , CG3459 , CG17847 , Or46F.2 , Or46F.1 , 14-3-3zeta , CG12405 , CG12430 , CG11761 , CG11763 , CG11765 , CG11777 , CPTI , CG12892 , Cyp49a1 , CG12895 , CG12896 , CG12897 , CG12898 , cdc2rk , CG12899 , CG1371 , sut4 , CG1381 , Def , CG12128 , CG12129 , CG12134 , Hr46 , CG11825 , CG12900 , CG12901 , CG12902 , CG12904 , CG12905 , CG12906 , CG12907 , CG12908 , CG12909 , CG12910 , CG12911 , CG12912 , CG12913 , CG12914 , CG12915 , CG12917 , CG12918 , CG12919 , CG11866 , CG11867 , CG12920 , CG12921
[plot]2R55000016010001CG12934 , CG12935 , CG11883 , CG12936 , CG12938 , CG12939 , CG11887 , CG12941 , CG12942 , CG12943 , CG12944 , stan , CG18353 , lola , CG18378 , CG18379 , CG18380 , CG18381 , CG16942 , CG7220 , CG7222 , Mat1 , CG7621 , CG7637 , CG11919 , CG18003 , CG18004 , BcDNA:LD21529 , CG7699 , CG11979 , CG17326 , CG17765 , CG12309 , CG12323 , CG12324 , CG12325 , CG12338 , CG12339 , BcDNA:LD26050 , CG12341 , CG12342 , CG12343 , CG12344 , cag , CG7701 , Taf80 , CG7712 , CG7722 , CG16728 , psq , lola , CG12431 , CG6751 , CG11761 , CPTI , CG11834 , Rab3
[plot]2R1300000113510001CG17669 , CG17671 , CG5098 , CG17680 , CG12263 , CG14495 , CG14496 , CG14497 , CG14498 , CG14499 , CG5109 , pAbp , CG5124 , CG5134 , Pepck , CG5140 , CG5154 , CG5164 , Dp1 , CG5174 , CG5186 , CG5189 , BcDNA:GH04922 , CG5190 , Gbp , CG5544 , BG5 , CG5580 , Ote , CG10911 , CG10912 , Sema-5c , CG10914 , CG10915 , CG10916 , fj , CG10924 , CG14500 , CG14501 , CG14502 , CG14503 , CG14504 , CG14505 , IM2 , CG18107 , CG18108 , CG12767 , CG18536 , CG18537 , CG18538 , CG18539 , CG5224 , CG5226 , CG18540 , CG17522 , CG17523 , CG17524 , CG17525 , CG17527 , CG17530 , CG17531 , CG16803 , CG17533 , CG17534 , CG16836 , CG16844 , CG16859 , CG5719 , CG5721 , CG5726 , Dgp-1 , CG5733 , CG5738 , CG5742 , Hsf , stau , CG5756 , CG5757 , CG5765 , CG5767 , CG5770 , CG5773 , CG15065 , CG15066 , CG15067 , CG15068 , CG15069
[plot]2R1400000114510001Scs-fp , Fak56D , CG10051 , CG10062 , CG16926 , CG10073 , CG10081 , wbl , CG7229 , CG7230 , CG10460 , CG10474 , CG10476 , CG15108 , CG15109 , BcDNA:LD21192 , CG15111 , enb , CG15116 , CG15117 , CG15118 , CG15119 , CG15120 , CG15121 , CG15122 , CG7626 , CG9416 , CG11906 , cora , CG11960 , CG11961 , CG9811 , CG9834 , CG15904 , CG11228 , CG11237 , CG11242 , CG11257 , Rep , RpL11 , CG7735 , CG7744 , mei-W68 , CG18152 , CG16701 , 5-HT1A , CG9975 , CG7417 , CG7097 , sm , CG7461 , betaTub56D , Elongin-C , FK506-bp2 , CG11007 , CG18606 , CG18607 , CG7137 , CG8201 , CG10737 , hts , CalpA
[plot]2R1750000118010001CG17281 , CG4329 , blw , CG3622 , Cyp6d2 , CG3649 , RpL17A , fd59A , CG2952 , CG3682 , twi , CG3695 , CG9825 , CG9826 , CG9848 , CG9849 , CG4046 , CG4071 , CG9890 , CG9893 , CG9895 , CG9896 , CG9897 , CG9898 , CG4414 , CG3700 , Cdk9 , CG3732 , CG3746 , CG3751 , CG11605 , CG3788 , CG11682 , CG12781 , CG3037 , l(2)k09913 , CG9952 , CG17807 , CG3800 , CG3495 , CG3499 , CG3820 , CG3831 , CG11362 , CG3875 , CG11716 , CG13509 , CG13510 , CG13511 , CG13512 , CG13513 , CG13514 , CG13515 , CG13516 , CG13517 , CG13518 , CG13519 , CG13520 , robo , CG13522 , CG13523 , CG13524 , CG13525 , CG13526 , CG13527 , CG13528 , CG13529 , CG13530 , CG13531 , CG13532 , CG13533 , CG13534 , CG13535 , CG13536 , CG12489 , CG13542 , CG12490 , CG4207 , CG3501 , CG4232 , inaD , CycB , CG4250 , CG3536 , CG4269 , CG3550 , CG4294 , CG2852 , CG3927 , CG12190
[plot]3L85000019010001CG5008 , CG5012 , CG5021 , CG5026 , CG5064 , CG5068 , CG5087 , CG5093 , CG6511 , Cp18 , Cp15 , Cp19 , CG13305 , CG13306 , CG13307 , CG13308 , CG13309 , Cp16 , CG5804 , CG13310 , CG13311 , CG13312 , CG13313 , CG13314 , CG6576 , CG18403 , Dorsocross , CG5144 , Argk , CG6239 , CG5187 , CG5194 , RpL14 , CG6282 , Prm , BcDNA:GM04779 , Arr2 , CG5971 , CG5978 , CG5989 , CG5994 , CG18153 , smg , CG5280 , CG5288 , CG4911 , CG6372 , CG5644 , CG5651 , CG5653 , CG4929 , CG5660 , CG4942 , CG4948 , dally , Mcm7 , CG4999 , CG17926 , CG6416 , CG6458 , CG5735 , CG6469 , CG5741 , CG5747 , CG5751 , CG6486 , CG6494 , CG5775 , CG5797
[plot]3L90000019510001CG4347 , CG3628 , CG4361 , CG3654 , CG4384 , CG3672 , CG4727 , CG3689 , CG13315 , bol , CG4022 , eIF-4E , CG18403 , CG17357 , CG4080 , CG4432 , aay , CG4437 , Shc , CG4446 , CG4447 , RpS9 , CG4452 , Hsp67Bb , Hsp22 , CG4461 , Hsp23 , Hsp27 , CG3743 , CG4476 , CG4477 , CG4481 , CG4483 , CG4484 , Rdl , Tequila , Klp67A , CG14178 , CG14179 , CG14180 , CG14181 , CG18153 , CG3408 , CG3424 , CG3426 , CG3428 , Uch-L3 , CG3434 , CG3437 , Hsp67Ba , CG3445 , CG3448 , Hsp26 , Hsp67Bc , CG3891 , CG17179 , Fdxh , CG3179 , CG3529 , CG18632 , CG3552 , CG3911 , CG4641 , RpS17 , CG4665 , CG4684 , CG3967 , CG12525 , CG12526 , CG3982
[plot]3L1800000118510001CG6897 , CG13695 , CG13696 , CG13699 , CG4306 , rpr , grim , CG7271 , CG7285 , CG13700 , CG13701 , CG13702 , CG13380 , CG13382 , Met75Cb , CG5103 , W , Cyp312a1 , CG7313 , CG7320 , CG7330 , CG7341 , not , CG4174 , CG18230 , CG18231 , CG18233 , CG18234 , term
[plot]3L1950000120010001CG9392 , Ac76E , CG15881 , CG8334 , Paps , Nca , CG7646 , CG7654 , CG7668 , cyc , Cyp305a1 , Gyc76C , CG8743 , CG8747 , CG8748 , CG8756 , gig , CG8765 , Gbeta76C , CG8780 , CG8782 , CG8786 , CG8789 , CG8793 , CG17732 , CG17736 , CG8004 , CG8013 , CG8025 , CG8037 , CG7323 , CG7328 , CG14101 , CG14102 , CG14103 , CG14104 , CG7335 , CG7348 , CG7365 , CG7385 , CG7395 , CG14182 , CG14183 , CG14184 , CG14185 , CG14186 , CG14187 , CG7749 , CG7757 , Rpn1 , CG8491 , CG7770 , Chd3 , CG7433 , fln , HLH106 , CG8533 , CG7809 , karyopherin-alpha1 , CG7823 , Deaf1 , CG18639 , Rab8 , CG7570 , Ndr , asf1 , CG8660
[plot]3L2050000121010001CG12979 , CG12980 , CG12981 , CG12982 , CG12983 , CG12984 , CH3 , Pka-R1 , CG3288 , CG3618 , CG3634 , CG4365 , kni , CG3680 , CG3698 , CG4042 , CG4074 , Mst77F , CG10554 , Ac78C , CG10565 , CG10566 , ko , CG10577 , fng , CG10581 , Sin , CG10584 , CG10585 , CG10586 , CG10587 , CG10588 , CG10589 , CG9936 , CG4186 , Six4 , CG11396 , CG11399 , CG12452 , CG3116 , CG11037 , Pitslre , CG4289 , CG18677 , CG3947 , CG11451 , CG11456 , CG11458 , CG13252 , CG13253 , CG13255 , CG13256 , CG13257
[plot]3R25000013010001CG1091 , sas , Dfd , Ama , CG10059 , CG10061 , CG10065 , CG10066 , CG10068 , CG10098 , BcDNA:LD24793 , CG1104 , CG1105 , BG:DS00276.8 , CG2640 , alphaTub84B , CG2656 , CG1939 , CG1943 , CG1965 , BG:DS00464.1 , dj , Sodh-1 , CG1984 , CG1988 , Ccp84Ab , lab , Ccp84Ad , Ccp84Ag , Edg84A , Ccp84Aa , pb , CG14610 , CG14611 , CG14612 , ftz , Ccp84Ac , Ccp84Ae , Ccp84Af , Mlp84B , Antp , Scr , bcd , zen , zen2 , CG1070
[plot]3R45000015010001CG9729 , CG9731 , pum , pyd , hb , CG9790 , CG9793 , CG9797 , CG13318 , CG8351 , CG8359 , CG8369 , CG8379 , CG18005 , CG11962 , CG11963 , CG11964 , CG11966 , CG11967 , CG11968 , CG9801 , BcDNA:GH12504 , BcDNA:LD23876 , CG11971 , CG11975 , CG11976 , CG11977 , CG11978 , CG11980 , Prosbeta3 , CG11982 , CG11983 , CG11984 , CG11985 , CG11986 , tgo , neur , CG9821 , CG11990 , Rel , Mst85C , CG11994 , CG11997 , CG9836 , CG9837 , CG9839 , Nmdmc , osk , CG8112 , CG8116 , CG8136 , CG12409 , CG8145 , CG8159 , CG11760 , CG11762 , CG11768 , CG11773 , CG11774 , CG11775 , CG11776 , CG11782 , BcDNA:GH04929 , CG11033 , CG8202 , CG8223 , CG8236
[plot]3R1100000111510001Oscp , CG5038 , CG5044 , CG6107 , CG5063 , CG4334 , CG6118 , CG4338 , CG6125 , CG5073 , CG6130 , CG5404 , CG6136 , CG6156 , CG6171 , ldlCp , CG6194 , CG6196 , CG12258 , CG14864 , CG14865 , CG14866 , CG14867 , CG14868 , CG14869 , CG14870 , CG14871 , CG14872 , CG14873 , CG14874 , CG5143 , Surf4 , CG5152 , CG6218 , CG5166 , FK506-bp1 , Act88F , CG18496 , CG6236 , Rh6 , CG6276 , Tm2 , Tm1 , CG18516 , CG18519 , CG5205 , CG18522 , CG5213 , CG4520 , MRG15 , CG4913 , ea , CG4923 , Cen190 , CG4931 , Aats-ser , CG5302 , CG6045 , Hsc70-4 , CG4285 , Set , CG5399 , Su(var)3-9 , CG6499
[plot]3R1450000115010001CG5449 , CG5451 , dnk , CG5454 , CG5456 , CG12269 , CG5835 , CG3768 , Cry , CG3773 , CG5555 , l(3)02102 , CG5558 , CG7717 , CG7718 , CG7719 , CG7720 , Rh2 , CG5217 , CG5237 , CG17836 , CG5250 , vib , BcDNA:GH03502 , CG5637 , CG11703 , CG14281 , CG14282 , CG14283 , CG14284 , CG14285 , CG14286 , CG14287 , CG14288 , CG14289 , CG11779 , CG14290 , CG14291 , CG14292 , CG14293 , CG14294 , CG14296 , CG14297 , CG14298 , CG14299 , CG18208 , CG6003 , CG6005 , gatA , NP15.6 , P5cr , Prp18 , CG6013 , CG6026 , cdi , ATPsyn-d , CG6040 , Cyp12a4 , Cyp12a5
[plot]3R1950000120010001CG6129 , KrT95D , CG5410 , Tsc1 , Rox8 , CG5429 , sec10 , CG6164 , Hsp68 , CG6173 , syx1A , CG6178 , CG6182 , CG5463 , Apc2 , CG6198 , Mpk2 , CG12268 , CG5854 , CG5857 , CG5864 , CG5875 , CG11945 , CG11957 , CG18428 , CG6204 , CG17741 , TfIIA-S , CG6219 , CG5501 , CG5510 , CG5515 , CG10192 , CG10193 , CG10198 , CG17786 , CG5524 , CG5534 , CG6268 , CG5902 , Rab7 , CG5926 , CG5933 , CG5977 , CG5986 , CG13818 , CG5991 , CG10201 , CG10208 , Pli , CG10210 , CG10214 , CG10217 , CG10219 , CG6313 , Pros26.4 , CG5669 , CG5677 , jar , CG10694 , CG12492 , CG13597 , sba , CG13599 , CG6000 , Gdh , CG6057 , CG5338 , Acp95EF , CG18671 , CG10374 , CG10375 , mbc , CG5706 , Aats-glupro , CG10716 , CG13600 , CG13601 , CG13602 , CG13603 , CG13604 , CG13605 , CG13606 , CG13607 , CG13608 , CG13609
[plot]X20000012510001gt , CG7981 , EG:25E8.1 , EG:25E8.2 , CG8310 , CG14045 , CG14047 , CG14048 , CG14049 , CG14050 , CG13756 , CG13757 , CG13758 , CG13759 , CG13760 , CG13761 , CG13762 , sgg , per , CG2650 , EG:155E2.5 , HLH3B , EG:100G10.7 , EG:100G10.6 , EG:100G10.5 , EG:100G10.3 , EG:100G10.4 , EG:100G10.2 , EG:100G10.1 , EG:100G10.8 , mit(1)15 , CG9904 , CG17437 , EG:25E8.3 , CG3073 , EG:30B8.6 , CG3091 , EG:95B7.9 , fs(1)Yb , fs(1)Ya , EG:95B7.5 , dwg , EG:95B7.7 , EG:95B7.3 , crm , EG:95B7.1 , CG10260 , z , CG12496 , CG12497 , Klp3A , egh , CG7894 , CG2841 , phl , CG2854 , EG:25E8.4 , EG:25E8.6 , CG10742 , CG8636 , tko
[plot]X40000014510001CG15473 , norpA , CG3626 , CG12212 , Fas2 , mei-9 , CG2982 , Pp2C1 , CG12684 , CG12685 , CG12686 , CG12687 , CG12688 , CG12691 , CG12692 , CG12693 , ctp , CG15570 , CG15571 , CG15572 , CG15573 , CG15574 , CG15575 , CG15576 , CG15577 , CG15578 , CG15579 , CG15912 , pon , CG3712 , fzr , CG3009 , EG:84H4.1 , HLH4C , EG:84H4.5 , EG:84H4.4 , Cbp80 , CG7038 , CG3527 , CG3546 , CG17592 , CG3556 , CG3564 , CG3568 , bi , rb , CG11436 , CG11444 , EG:66A1.2 , EG:66A1.3
[plot]X55000016010001CG18341 , Mipp2 , CG4320 , rux , CG15899 , CG3648 , CG12236 , CG12239 , CG4746 , BcDNA:GH11415 , CG4790 , CG14447 , CG5894 , CG4020 , Act5C , CG4052 , CG4064 , CG15929 , CG4078 , CG4096 , CG3726 , CG5905 , CG5914 , CG5921 , CG5928 , CG5937 , CG5941 , CG12728 , CG12729 , CG5966 , CG5980 , CG3011 , CG3016 , mof , CG3033 , MAPk-Ak2 , CG16721 , CG3097 , CG12410 , CG3108 , CG3125 , CG3130 , CG3138 , CG3141 , BcDNA:GH08388 , CG4222 , CG15764 , CG15765 , CG15766 , CG15767 , CG15768 , CG15769 , CG15770 , CG15771 , CG15772 , CG15773 , CG15774 , CG15775 , CG6041 , CG6048 , CG6067 , CG4660 , CG4666 , CG11462 , CG11465 , CG4690 , CG12544
[plot]X70000017510001CBP , CG12689 , CHES-1-like , CG1958 , CG1999 , CG18155 , CG1643 , unc-119 , CG1677 , CG11368 , CG11369 , ct , CG2059 , CG9650 , brk , CG9657 , CG2079 , CG15033 , CG15034 , CG15035 , CG15036
[plot]X80000018510001CG2147 , Gr , CG2156 , CG1440 , Es2 , Cp36 , CG11190 , Trf2 , CG12658 , CG12659 , CG18009 , CG1521 , ND75 , org-1 , Cp38 , PIP82 , CG11265 , CG10555 , CG11284 , CG11294 , CRAG , otu , CG10964 , CG10965 , CG12772 , nAcRalpha-7E , CG1617 , CG1632 , Nrg , CG1636 , CG12065 , CG12081 , CG2004 , CG15340 , CG15341 , CG15342 , CG15343 , CG15344 , CG15345 , CG15347 , CG15348 , CG15349 , CG15350 , CG15351 , CG2056 , CG1387 , CG12108 , CG12109 , CG12111 , CG12112 , CG12113 , CG12116 , Sptr , CG1785 , CG1787 , CG12123 , CG12125 , BcDNA:LD19945 , oc
[plot]X1400000114510001CG18313 , CG1461 , CG15890 , CG9400 , CG9404 , CG9411 , CG9413 , CG14413 , CG14414 , CG14415 , CG12694 , CG1517 , NetB , CG13404 , CG18157 , CG5228 , CG12047 , CG5291 , CG5310 , CG5321 , NetA , CG11477 , CG12540
[plot]X2000000120510001CG15450 , CG15451 , CG15452 , CG15453 , CG15454 , CG15455 , CG15456 , CG15457 , CG15458 , CG15459 , CG1412 , CG15460 , CG15461 , Pp4-19C , CG1467 , CG1812 , Cyp6v1 , CG1835 , run , CG12678 , CG12679 , Pp4-19C , CG11233 , CG11235 , CG11692 , Pbprp2 , CG1670 , CG1676 , mal , CG1695 , CG11710 , HERC2 , CG11738 , CG11748 , CG1314 , shakB , CG1324 , CG1338 , CG1379 , CG1702 , CG1388