cis-Analyst Whole Genome Plots (from Berman et. al. 2001)

Number of clusters per arm:

Clusters on arm 2L = 3
Clusters on arm 2R = 4
Clusters on arm 3L = 4
Clusters on arm 3R = 2
Clusters on arm 4 = 0
Clusters on arm X = 3
Clusters total (non-overlapping) = 16

Links to 500kb segment plots
(only those segments with at least one cluster are displayed)

PlotArmStart(bp)End(bp)Genes
[plot]2L35000014010001CG10017 , CG10019 , CG10020 , bowl , CG10022 , CG10030 , CG10031 , for , CG10039 , CG3604 , slp2 , CG12675 , CG12676 , CG3390 , CG3393 , capu , CG16704 , CG16712 , CG16713 , CG3407 , CG3410 , slp1 , CG2788 , odd , CG3513 , CG2808 , CG2816 , CG2818 , Shaw , CG3920 , CG3921 , CG3964 , CG3980 , CG15416 , CG15418 , CG15419 , CG15420 , CG15421 , CG15422 , CG15423
[plot]2L1250000113010001CG15483 , CG15484 , CG15485 , CG15486 , CG15487 , CG15488 , CG5075 , CG5092 , CG6153 , CG6167 , CG6180 , kek1 , pdm2 , CG12292 , CG5142 , CG6214 , nub , CG5525 , CG3762 , CG17031 , CG17036 , CG5983 , CG9932 , CG9933 , CG9934 , Vha68 , CG12404 , CG17174 , CG17176 , CG17178 , CG16800 , CG5776 , CG5780 , CG5781 , CG5787 , CG5792
[plot]2L1350000114010001BG:DS00941.14 , BG:DS00941.15 , BG:DS08220.1 , BG:DS00797.2 , BG:DS08249.3 , BG:BACR48E02.4 , BG:DS05899.7 , BG:DS08249.2 , BG:DS05899.4 , BG:DS00797.1 , p38b , Ance , BG:DS01759.2 , Sos , BG:DS00180.12 , BG:DS00180.14 , Cyp28a5 , BG:DS01368.1 , BG:DS05899.1 , bgm , b , CG7491 , CAH1 , Orc5 , rk , RpII33 , BG:DS00180.10 , CG8954 , DNApol-gamma35 , Sop2 , tam , BG:DS00941.12 , CG18634 , CG16861 , BG:DS00797.6 , BG:DS00941.3 , CG16866 , CG16867 , CG16869 , Acyp , BG:DS00180.9 , BG:DS05899.3 , BG:DS05899.5 , BG:DS01759.1 , l(2)34Fa , BG:DS00180.8 , BG:DS00180.3 , CG16885 , BG:DS00180.2 , BG:DS00941.11 , CG16888 , adat , BG:DS00797.4 , kuz , CG17988 , BG:DS00797.5 , BG:DS00797.7 , BG:DS00941.13
[plot]2R45000015010001CG12930 , CG12931 , CG12932 , CG12933 , CG1418 , Mef2 , CG1441 , CG1472 , CG1809 , CG1814 , CG1818 , CG15863 , CG1821 , Map60 , CG1827 , CG1863 , CG1868 , CG1874 , CG1884 , CG1888 , CG10459 , CG1513 , BcDNA:GH06348 , Prosalpha7 , CG18446 , CG1902 , Orc6 , Wnt2 , CG1599 , CG1931 , CG10536 , CG12744 , CG8809 , eve , Fmrf , CG1623 , CG1625 , CG1648 , CG1652 , CG1656 , CG1663 , CG1665 , CG1667 , CG1671 , CG1675 , BcDNA:GH04802 , CG1690 , trpl , CG1698 , dap , CG1773 , CG1776 , Uba1 , CG1794 , CG12130 , CG12131 , CG12133 , CG12134 , CG12138 , CG12140 , CG12922 , CG12923 , CG12924 , CG12926 , CG12927 , CG12928 , CG12929
[plot]2R50000015510001CG1407 , CG15862 , CG18377 , CG3298 , CG12208 , CG12209 , Syb , CG12214 , CG12215 , CG18011 , G-oalpha47A , Pfk , CG2249 , CG18408 , CG18409 , CG2264 , CG2269 , Jra , CG2292 , CG18445 , CG17753 , CG17765 , eve , TER94 , CG3451 , CG3454 , CG3459 , CG17847 , Or46F.2 , Or46F.1 , 14-3-3zeta , CG12405 , CG12430 , CG11761 , CG11763 , CG11765 , CG11777 , CPTI , CG12892 , Cyp49a1 , CG12895 , CG12896 , CG12897 , CG12898 , cdc2rk , CG12899 , CG1371 , sut4 , CG1381 , Def , CG12128 , CG12129 , CG12134 , Hr46 , CG11825 , CG12900 , CG12901 , CG12902 , CG12904 , CG12905 , CG12906 , CG12907 , CG12908 , CG12909 , CG12910 , CG12911 , CG12912 , CG12913 , CG12914 , CG12915 , CG12917 , CG12918 , CG12919 , CG11866 , CG11867 , CG12920 , CG12921
[plot]2R55000016010001CG12934 , CG12935 , CG11883 , CG12936 , CG12938 , CG12939 , CG11887 , CG12941 , CG12942 , CG12943 , CG12944 , stan , CG18353 , lola , CG18378 , CG18379 , CG18380 , CG18381 , CG16942 , CG7220 , CG7222 , Mat1 , CG7621 , CG7637 , CG11919 , CG18003 , CG18004 , BcDNA:LD21529 , CG7699 , CG11979 , CG17326 , CG17765 , CG12309 , CG12323 , CG12324 , CG12325 , CG12338 , CG12339 , BcDNA:LD26050 , CG12341 , CG12342 , CG12343 , CG12344 , cag , CG7701 , Taf80 , CG7712 , CG7722 , CG16728 , psq , lola , CG12431 , CG6751 , CG11761 , CPTI , CG11834 , Rab3
[plot]2R1300000113510001CG17669 , CG17671 , CG5098 , CG17680 , CG12263 , CG14495 , CG14496 , CG14497 , CG14498 , CG14499 , CG5109 , pAbp , CG5124 , CG5134 , Pepck , CG5140 , CG5154 , CG5164 , Dp1 , CG5174 , CG5186 , CG5189 , BcDNA:GH04922 , CG5190 , Gbp , CG5544 , BG5 , CG5580 , Ote , CG10911 , CG10912 , Sema-5c , CG10914 , CG10915 , CG10916 , fj , CG10924 , CG14500 , CG14501 , CG14502 , CG14503 , CG14504 , CG14505 , IM2 , CG18107 , CG18108 , CG12767 , CG18536 , CG18537 , CG18538 , CG18539 , CG5224 , CG5226 , CG18540 , CG17522 , CG17523 , CG17524 , CG17525 , CG17527 , CG17530 , CG17531 , CG16803 , CG17533 , CG17534 , CG16836 , CG16844 , CG16859 , CG5719 , CG5721 , CG5726 , Dgp-1 , CG5733 , CG5738 , CG5742 , Hsf , stau , CG5756 , CG5757 , CG5765 , CG5767 , CG5770 , CG5773 , CG15065 , CG15066 , CG15067 , CG15068 , CG15069
[plot]3L85000019010001CG5008 , CG5012 , CG5021 , CG5026 , CG5064 , CG5068 , CG5087 , CG5093 , CG6511 , Cp18 , Cp15 , Cp19 , CG13305 , CG13306 , CG13307 , CG13308 , CG13309 , Cp16 , CG5804 , CG13310 , CG13311 , CG13312 , CG13313 , CG13314 , CG6576 , CG18403 , Dorsocross , CG5144 , Argk , CG6239 , CG5187 , CG5194 , RpL14 , CG6282 , Prm , BcDNA:GM04779 , Arr2 , CG5971 , CG5978 , CG5989 , CG5994 , CG18153 , smg , CG5280 , CG5288 , CG4911 , CG6372 , CG5644 , CG5651 , CG5653 , CG4929 , CG5660 , CG4942 , CG4948 , dally , Mcm7 , CG4999 , CG17926 , CG6416 , CG6458 , CG5735 , CG6469 , CG5741 , CG5747 , CG5751 , CG6486 , CG6494 , CG5775 , CG5797
[plot]3L1800000118510001CG6897 , CG13695 , CG13696 , CG13699 , CG4306 , rpr , grim , CG7271 , CG7285 , CG13700 , CG13701 , CG13702 , CG13380 , CG13382 , Met75Cb , CG5103 , W , Cyp312a1 , CG7313 , CG7320 , CG7330 , CG7341 , not , CG4174 , CG18230 , CG18231 , CG18233 , CG18234 , term
[plot]3L2050000121010001CG12979 , CG12980 , CG12981 , CG12982 , CG12983 , CG12984 , CH3 , Pka-R1 , CG3288 , CG3618 , CG3634 , CG4365 , kni , CG3680 , CG3698 , CG4042 , CG4074 , Mst77F , CG10554 , Ac78C , CG10565 , CG10566 , ko , CG10577 , fng , CG10581 , Sin , CG10584 , CG10585 , CG10586 , CG10587 , CG10588 , CG10589 , CG9936 , CG4186 , Six4 , CG11396 , CG11399 , CG12452 , CG3116 , CG11037 , Pitslre , CG4289 , CG18677 , CG3947 , CG11451 , CG11456 , CG11458 , CG13252 , CG13253 , CG13255 , CG13256 , CG13257
[plot]3R45000015010001CG9729 , CG9731 , pum , pyd , hb , CG9790 , CG9793 , CG9797 , CG13318 , CG8351 , CG8359 , CG8369 , CG8379 , CG18005 , CG11962 , CG11963 , CG11964 , CG11966 , CG11967 , CG11968 , CG9801 , BcDNA:GH12504 , BcDNA:LD23876 , CG11971 , CG11975 , CG11976 , CG11977 , CG11978 , CG11980 , Prosbeta3 , CG11982 , CG11983 , CG11984 , CG11985 , CG11986 , tgo , neur , CG9821 , CG11990 , Rel , Mst85C , CG11994 , CG11997 , CG9836 , CG9837 , CG9839 , Nmdmc , osk , CG8112 , CG8116 , CG8136 , CG12409 , CG8145 , CG8159 , CG11760 , CG11762 , CG11768 , CG11773 , CG11774 , CG11775 , CG11776 , CG11782 , BcDNA:GH04929 , CG11033 , CG8202 , CG8223 , CG8236
[plot]3R1100000111510001Oscp , CG5038 , CG5044 , CG6107 , CG5063 , CG4334 , CG6118 , CG4338 , CG6125 , CG5073 , CG6130 , CG5404 , CG6136 , CG6156 , CG6171 , ldlCp , CG6194 , CG6196 , CG12258 , CG14864 , CG14865 , CG14866 , CG14867 , CG14868 , CG14869 , CG14870 , CG14871 , CG14872 , CG14873 , CG14874 , CG5143 , Surf4 , CG5152 , CG6218 , CG5166 , FK506-bp1 , Act88F , CG18496 , CG6236 , Rh6 , CG6276 , Tm2 , Tm1 , CG18516 , CG18519 , CG5205 , CG18522 , CG5213 , CG4520 , MRG15 , CG4913 , ea , CG4923 , Cen190 , CG4931 , Aats-ser , CG5302 , CG6045 , Hsc70-4 , CG4285 , Set , CG5399 , Su(var)3-9 , CG6499
[plot]X20000012510001gt , CG7981 , EG:25E8.1 , EG:25E8.2 , CG8310 , CG14045 , CG14047 , CG14048 , CG14049 , CG14050 , CG13756 , CG13757 , CG13758 , CG13759 , CG13760 , CG13761 , CG13762 , sgg , per , CG2650 , EG:155E2.5 , HLH3B , EG:100G10.7 , EG:100G10.6 , EG:100G10.5 , EG:100G10.3 , EG:100G10.4 , EG:100G10.2 , EG:100G10.1 , EG:100G10.8 , mit(1)15 , CG9904 , CG17437 , EG:25E8.3 , CG3073 , EG:30B8.6 , CG3091 , EG:95B7.9 , fs(1)Yb , fs(1)Ya , EG:95B7.5 , dwg , EG:95B7.7 , EG:95B7.3 , crm , EG:95B7.1 , CG10260 , z , CG12496 , CG12497 , Klp3A , egh , CG7894 , CG2841 , phl , CG2854 , EG:25E8.4 , EG:25E8.6 , CG10742 , CG8636 , tko
[plot]X40000014510001CG15473 , norpA , CG3626 , CG12212 , Fas2 , mei-9 , CG2982 , Pp2C1 , CG12684 , CG12685 , CG12686 , CG12687 , CG12688 , CG12691 , CG12692 , CG12693 , ctp , CG15570 , CG15571 , CG15572 , CG15573 , CG15574 , CG15575 , CG15576 , CG15577 , CG15578 , CG15579 , CG15912 , pon , CG3712 , fzr , CG3009 , EG:84H4.1 , HLH4C , EG:84H4.5 , EG:84H4.4 , Cbp80 , CG7038 , CG3527 , CG3546 , CG17592 , CG3556 , CG3564 , CG3568 , bi , rb , CG11436 , CG11444 , EG:66A1.2 , EG:66A1.3
[plot]X2000000120510001CG15450 , CG15451 , CG15452 , CG15453 , CG15454 , CG15455 , CG15456 , CG15457 , CG15458 , CG15459 , CG1412 , CG15460 , CG15461 , Pp4-19C , CG1467 , CG1812 , Cyp6v1 , CG1835 , run , CG12678 , CG12679 , Pp4-19C , CG11233 , CG11235 , CG11692 , Pbprp2 , CG1670 , CG1676 , mal , CG1695 , CG11710 , HERC2 , CG11738 , CG11748 , CG1314 , shakB , CG1324 , CG1338 , CG1379 , CG1702 , CG1388